分子病原生物学研究组

Laboratory of Molecular Pathogen Biology

代表性论文
1.


Yu X, Wang C, Zhao Y, Tang J, Zhu M, Platon L, Culleton R, Zhu G*, Ménard D*Zhang Q*, Cao J*. Ring-stage growth arrest: Metabolic basis of artemisinin tolerance in Plasmodium falciparum. iScience. 2022 Dec 5;26(1):105725.

2.

Cao G, Yue J, Ruan Y, Han Y, Zhi Y, Lu J, Liu M, Xu X, Wang J, Gu Q, Wen X, Gao J,  Zhang Q, Kang J, Wang C*, Li F*. Single-cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment. EMBO J. 2023 Jul 10:e110757.


3.


Liu M, Han Z, Zhi Y, Ruan Y, Cao G, Wang G, Xu X, Mu J, Kang J, Dai F, Wen X, Zhang Q*, Li F*. Long-read sequencing reveals oncogenic mechanism of HPV-human fusion transcripts in cervical cancer. Translational Research. 2023 Mar;253:80-94.

4.


Xu X, Wang Y, Wang C, Guo G, Yu X, Dai Y, Liu Y, Wei G, He X, Jin G, Zhang Z, Guan Q, Pain A, Wang S, Zhang W, Young ND, Gasser RB, McManus DP*, Cao J*, Zhou Q*, Zhang Q*.Chromosome-level genome assembly defines female-biased genes associated with sex determination and differentiation in the human blood fluke Schistosoma japonicum. Molecular Ecology Resources. 2023 Jan;23(1):205-221.

5.

  1. Shang X, Wang C, Fan Y, Guo G, Wang F, Zhao Y, Sheng F, Tang J, He X, Yu X, Zhang M, Zhu G, Yin S, Mu J, Culleton R, Cao J*, Jiang M*, Zhang Q*. Genome-wide landscape of ApiAP2 transcription factors reveals a heterochromatin-associated regulatory network during Plasmodium falciparum blood-stage development. Nucleic Acids Research2022. 50(6):3413-3431. 

6.

  1. Liu M, Guo G, Qian P, Mu J, Lu B, He X, Shang X, Yang G, Shen S, Liu W, Wang L, Gu L, Mu Q, Yu X, Zhao Y, Culleton R, Cao J, Jiang L, Wellems T*, Yuan J*, Jiang C*, Zhang Q*. 5-methylcytosine modification by Plasmodium NSUN2 stabilizes mRNA and mediates the development of gametocytes. PNAS. 2022. 119(9):e2110713119.

7.

Shang X, Shen S*, Tang J, He X, Zhao Y, Wang C, He X, Guo G, Liu M, Wang L, Zhu Q, Yang G, Jiang C, Zhang M, Yu X, Han J, Culleton R, Jiang L, Cao J*, Gu L*, Zhang Q*. A cascade of transcriptional repression determines sexual commitment and development in Plasmodium falciparum. Nucleic Acids Research. 2021. 49(16): 9264-9279.

8.

Lu B, Liu M, Gu L, Li Y, Shen S, Guo G, Wang F, He X, Zhao Y, Shang X, Wang L, Yang G, Zhu Q, Cao J, Jiang C, Culleton R, Wei G*, Zhang Q*. The Architectural Factor HMGB1 Is Involved in Genome Organization in the Human Malaria Parasite Plasmodium falciparum. mBio. 2021; 12(2):e00148-21.

9.

Yang M, Shang X, Zhou Y, Wang C, Wei G, Tang J, Zhang M, Liu Y, Cao J*, Zhang Q*. Full-Length Transcriptome Analysis of Plasmodium falciparum by Single-Molecule Long-Read Sequencing. Front Cell Infect Microbiol. 2021; 11:631545.


10.

Zhao Y, Wang F, Wang C, Zhang X, Jiang C, Ding F, Shen L*, Zhang Q*. Optimization of CRISPR/Cas System for Improving Genome Editing Efficiency in Plasmodium falciparum. Front Microbiol. 2021; 11:625862.


11.

Fan Y, Shen S, Wei G, Tang J, Zhao Y, Wang F, He X, Guo G, Shang X, Yu X, Ma Z, He X, Liu M, Zhu Q, Le Z, Wei G, Cao J, Jiang C*, Zhang Q*. Rrp6 Regulates Heterochromatic Gene Silencing via ncRNA RUF6 Decay in Malaria Parasites. mBio. 2020; 11:e01110-20.

12.

Yin S, Fan Y, He X, Wei G, Wen Y, Zhao Y, Shi M, Wei J, Chen H, Han J, Jiang L*, Zhang Q*. The cryptic unstable transcripts are associated with developmentally regulated gene expression in blood-stage Plasmodium falciparum. RNA Biology. 2020; 17(6):828-842. 

13.

Liu M, Lu B, Fan Y, He X, Shen S, Jiang C*, Zhang Q*. TRIBE Uncovers the Role of Dis3 in Shaping the Dynamic Transcriptome in Malaria Parasites.Front Cell Infect Microbiol. 2019; 7:264. 

14.

Droll D, Wei G, Guo G, Fan Y, Baumgarten S, Zhou Y, Xiao Y, Scherf A*, Zhang Q*. Disruption of the RNA exosome reveals the hidden face of the malaria parasite transcriptome. RNA Biology. 2018;15(9):1206-1214.

15.

Zhang Q*, Siegel TN, Martins RM, Wang F, Cao J, Gao Q, Cheng X, Jiang L, Hon CC, Scheidig-Benatar C, Sakamoto H, Turner L, Jensen AT, Claes A, Guizetti J, Malmquist NA, Scherf A*. Exonuclease-mediated degradation of nascent RNA silences genes linked to severe malaria. Nature. 2014513(7518):431-5.

16.

Zhang Q, Huang Y, Zhang Y, Fang X, Claes A, Duchateau M, Namane A, Lopez-Rubio JJ, Pan W*, Scherf A*. A critical role of perinuclear filamentous actin in spatial repositioning and mutually exclusive expression of virulence genes in malaria parasites. Cell Host Microbe. 2011 Nov 17;10(5):451-63.

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